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Publications Supported by BIOSS

2009

Neurological Symptoms in Patients with Biopsy Proven Celiac Disease (2009). Burk, K; Farecki, ML; Lamprecht, G, et al. Movement Disorders 24, 16, 2358-2362
Milenkovic, D., Ramming, T., Muller, J. M., Wenz, L. S., Gebert, N., Schulze-Specking, A., Stojanovski, D., Rospert, S., and Chacinska, A. (2009). Identification of the Signal Directing Tim9 and Tim10 into the intermembrane Space of Mitochondria. Mol. Biol. Cell 20, 2530-2539
von Plehwe, U., Berndt, U., Conz, C., Chiabudini, M., Fitzke, E., Sickmann, A., Petersen, A., Pfeifer, D., and Rospert, S. (2009). The Hsp70 homolog Ssb is essential for glucose sensing via the SNF1 kinase network. Genes Dev. 23, 2102-2115
Mason, J.M., Müller, K.M., Arndt, K.M. (2009): Peptides Tailored to Interfere with Protein Interaction and Function. Chemistry Today 27(2), 47-50
Jouaux, E.M., Timm, B.B., Arndt, K.M., Exner, T.E. (2009). Improving the Interaction of Myc-Interfering Peptides with Myc Using Molecular Dynamics Simulations. J. Pept. Sci. 15(1), 5-15.
Mason, J.M., Hagemann, U.B., Arndt, K.M. (2009): Role of Hydrophobic and Electrostatic Interactions in Coiled Coil Stability and Specificity. Biochemistry 48(43), 10380-10388.
Wiedemann, N., Meisinger, C., and Pfanner, N. (2009). Cell biology: connecting organelles. Science 325, 403-404.
Becker, T., Gebert, M., Pfanner, N., and van der Laan, M. (2009): Biogenesis of mitochondrial membrane proteins. Curr. Opin. Cell Biol. 21, 484-493.
Kutik, S., Stroud, D.A., Wiedemann, N., and Pfanner, N. (2009): Evolution of mitochondrial protein biogenesis. Biochim. Biophys. Acta 1790, 409-415
Gebert, N., Joshi, A.S., Kutik, S., Becker, T., McKenzie, M., Guan X.L., Mooga, V.P., Stroud, D.A., Kulkarni, G., Wenk, M.R., Rehling P., Meisinger, C., Ryan, M.T., Wiedemann, N., Greenberg, M.L., and Pfanner, N. (2009): Mitochondrial cardiolipin involved in outer-membrane protein biogenesis: implications for Barth syndrome. Curr. Biol. 19, 2133-2139.
Wagner K., Rehling, P., Sanjuán Szklarz, L.K., Taylor, R.D., Pfanner, N., and van der Laan, M. (2009): Mitochondrial F₁F_o-ATP synthase: the small subunits e and g associate with monomeric complexes to trigger dimerization. J. Mol. Biol. 392, 855-861.
Chacinska, A., Koehler, C.M., Milenkovic, D., Lithgow, T., and Pfanner, N. (2009): Importing mitochondrial proteins: machineries and mechanisms. Cell 138, 628-644
Wang, Q.; Ronneberger, O.; Schulze, E.; Baumeister, R.; Burkhardt, H. (2009): Using Lateral Coupled Snakes for Modeling the Contours of Worms. In: J. Denzler, G. Notni, and H. Süße (Eds.): DAGM 2009, LNCS 5748, pp. 542–551
Temerinac, M.; Burkhardt, H. (2009): Multichannel Image Restoration Based on Optimization of the Structural Similarity Index. In: Proceedings of 43rd Asilomar Conference on Signals, Systems and Computers, pp. 812-816, 1-4 November 2009, Pacific Grove, USA
Bensch, R.; Ronnerberger, O.; Greese, B.; Fleck, C.; Wester, K.; Hülskamp, M.; Burkhardt, H. (2009): Image analysis of Arabidopsis trichome patterning in 4D confocal datasets. In: 6th IEEE International Symposium on Biomedical Imaging: From Nano to Macro. ISBI 2009.
Hundorfean, G; Neurath, MF; Sitaru C. (2009): Autoimmunity against type VII collagen in inflammatory bowel disease. J Cell Mol Med. 2009 Oct 31. [Epub ahead of print]
Sitaru, C. (2009): Bullous Pemphigoid: A Prototypical Antibody-Mediated Organ-Specific Autoimmune Disease. Journal of Investigative Dermatology 129, 822-824
van der Graaff E., Laux T., Rensing S.A. (2009): The WUS homeobox-containing (WOX) protein family. Genome Biology 10:248
N. Wangler, M. Welsche, M. Laufer, A. Träger, N. Paust, M. Thielen, O. Sobolev, G. Roth, R. Zengerle, J. Steigert (2009): Predictable and Defined Microgradients in Liquid Environment for Chemical Single Cell Stimulation. Proceedings 13th International Conference on Miniaturized Systems for Chemistry and Life Sciences.
M. Welsche, N. Wangler, M. Laufer, A. Träger, M. Thielen, M.Daub, R. Zengerle, J. Steigert (2009): Rapid Single Cell Transfection by Localised and Discreate Release of DNA-Lipid Nanoemulsions. Proceedings 13th International Conference on Miniaturized Systems for Chemistry and Life Sciences
Beetz, N.; , M. D. Harrison,, M.D.; Brede, M.; Zong, X.; Urbanski, M.J.; Sietmann, A.; Kaufling, J.; Barrot, M. Seeliger, M. W.; Vieira-Coelho, M.A.; Hamet, P.; Gaudet, D.; Seda, O.; Tremblay, J.; Kotchen, T.A.; Kaldunski, M.; Nüsing R.; Szabo, B.; Jacob, H.J.; Cowley, A. W. Jr., Biel, M.; Stoll, M.; Lohse, M .J.; Broeckel, U. and L. Hein, L. (2009): Phosducin influences sympathetic activity and prevents stress-induced hypertension in humans and mice. The Journal of Clinical Investigation, 119(12): 3597-3612.
Milenkovic, D., Ramming, T., Muller, J. M., Wenz, L. S., Gebert, N., Schulze-Specking, A., Stojanovski, D., Rospert, S., and Chacinska, A. (2009): Identification of the Signal Directing Tim9 and Tim10 into the intermembrane Space of Mitochondria. Mol Biol Cell 20, 2530-2539
von Plehwe, U., Berndt, U., Conz, C., Chiabudini, M., Fitzke, E., Sickmann, A., Petersen, A., Pfeifer, D., and Rospert, S. (2009): The Hsp70 homolog Ssb is essential for glucose sensing via the SNF1 kinase network. Genes Dev 23, 2102-2115.
Bartels, S., Anderson, J.C., González Besteiro, M.A., Carreri, A., Hirt, H., Buchala, A., Métraux, J.P., Peck, S.C., and Ulm, R. (2009): MAP KINASE PHOSPHATASE1 and PROTEIN TYROSINE PHOSPHATASE1 are repressors of salicylic acid synthesis and SNC1-mediated responses in Arabidopsis. Plant Cell 21: 2884-2897.
Stracke, R., Favory, J.J., Gruber, H., Bartelniewoehner, L., Bartels, S., Binkert, M., Funk, M., Weisshaar, B., and Ulm, R.(2009): The Arabidopsis bZIP transcriptional regulator HY5 activates expression of the PFG1/MYB12 gene in response to light and UV-B radiatio. Plant Cell Env., accepted for publication.
Kulathu, Y.; Grothe, G.; Reth, M. (2009): Autoinhibition and adapter function of Syk. Immunological Reviews, Volume 232, Number 1, pp. 286-299(14)
Vögtle, F.N., Wortelkamp, S., Zahedi, R.P., Becker, D., Leidhold, C., Gevaert, K., Kellermann, J., Voos, W., Sickmann, A., Pfanner, N., and Meisinger, C.(2009): Global analysis of the mitochondrial N-Proteome identifies a processing peptidase critical for protein stability Cell 139, 428-439
Rohrbach, A. (2009): Artifacts resulting from imaging in scattering media: a theoretical prediction. Optics Letters 34, Nr. 19, 3041-3043.
Wöhrle, F.; Daly, R.; Brummer, T. (2009): Function, regulation and pathological roles of the Gab/DOS docking proteins. Cell communication and Signaling 7:22
Panigrahi, K.C.S., M. Panigrahy, M. Vervliet-Scheebaum, D. Lang, R. Reski, M.M. Johri (2009): Auxin-binding proteins without KDEL sequence in the moss Funaria hygrometrica. Plant Cell Rep (2009) 28:1747-1758
Martin, A., D. Lang, S.T. Hanke, S.J.X. Mueller, E. Sarnighausen, M. Vervliet-Scheebaum, R. Reski (2009): Targeted gene knockouts reveal overlapping functions of the five Physcomitrella patens FtsZ isoforms in chloroplast division, chloroplast shaping, cell patterning, plant development, and gravity sensing. Molecular Plant 2, 1359-1372. Supplemental information
Boettger T*, Beetz N*, Kostin S, Schneider J, Krüger M, Hein L, Braun T. (2009): Acquisition of the contractile phenotype by murine arterial smooth muscle cells depends on the Mir143/145 gene cluster. Journal of Clinical Investigation 119, 2634-2647
Beetz N, Hein L, Meszaros J, Gilsbach R, Barreto F, Meissner M, Hoffe UC, Schwartz A, Herzig S, Matthes J (2009): Transgenic simulation of human heart failure-like L-type Ca2+-channels: implications for fibrosis and heart rate in mice. Cardiovascular Research 2009
Weber, W.; Fussenegger, M. (2009): The impact of Synthetic Biology on Drug Discovery. Drug Discovery today 14(19-20):956-63
Wöhrle, F.; Daly, R.; Brummer, T. (2009): How to Grb2 a Gab. Structure 17, 779-781
Mosquna A., Katz A., Decker E.L., Rensing S.A., Reski R., Ohad N. (2009): Regulation of stem cell maintenance by the Polycomb protein FIE has been conserved during land plant evolution. Development 136, 2433-2444
Sämann, J.; Hegermann, J.; von Gromoff, E.; Eimer, S.; Baumeister, R.; Schmidt, E. (2009): Caenorhabditits elegans LRK-1 and PINK-1 Act Antagonistically in Stress Response and Neurite Outgrowth. J Biol Chem. 284(24):16482-91
Zolles, G.; Wenzel, D.; Bildl, W.; Schulte, U.; Hoffmann, A.; Müller, C.; Thumfart, J.U.; Vlachos, A.; Deller, T.; Pfeifer, A.; Fleischmann, B.; Roeper, J.; Fakler, B.; Kloecker, N. (2009): Association with the Auxiliary Subunit PEX5R/Trip8b Controls Responsiveness of HCN Channels to cAMP and Adrenergic Stimulation. Neuron 62, 814-825.
Paponov, I.A., Teale, W.; Lang, Paponov, D.M.: Reski,R.; Rensing, S.A.; Palme, K. (2009): The evolution of nuclear auxin signalling. BMC Evolutionary Biology 9, 126
Steigert, J.; Strasser, M.; Wangler, N.; Brett, O.; Streule, W.; Koltay, P.; Daub, M.; Zengerle, R. (2009): A modular diffusion barrier based on phase separation for localized delivery of discrete drug volumes in aqueous environments. Lab Chip 9, 1801 - 1805
Mittler, G.; Butter, F.; Mann, M. (2009): A SILAC-based DNA protein interaction screen that identifies candidate binding proteins to functional DNA elements. Genome Res.19: 284-293
Herzog, S.; Reth, M.; Jumaa, H. (2009): Regulation of B-cell proliferation and differentiation by pre-B-cell receptor signalling. Nat Rev Immunol 9: 195-205
Boldt, J.; Müller, O.; Maio, G (2009): Synthetische Biologie. Eine ethisch-philosophische Analyse. Beiträge zu Ethik und Biotechnologie Nr. 5.
Fehrenbach, K., Lessmann, E., Zorn, C. N., Kuhny, M., Grochowy, G., Krystal, G. Leitges, M., and Huber, M 2009: Steel Factor enhances supra-optimal antigen-induced interleukin-6 production from mast cells via activation of protein kinase C-? J. Immunol. 2009: 82;7897-7905
Grochowy, G., Hermiston, M. L., Kuhny, M., Weiss, A., and Huber, M. (2009): Requirement for CD45 in Fine-Tuning Mast Cell Responses Mediated by Different Ligand-Receptor Systems. Cellular Signalling Vol. 8, Issue 8, 1277-1286.
Wang, Q.; Ronneberger, O.; Burkhardt, H.(2009): Rotational Invariance Based on Fourier Analysis in Polar and Spherical Coordinates. IEEE Transactions on Pattern Analysis and Machine Intelligence, vol. 31, no. 9, pp. 1715-1722, doi:10.1109/TPAMI.2009.29
Patterson, K.; Brummer, T.; O´Brien, P.; Daly, R.: Dual-specificity phosphatases: critical regulators with diverse cellular targets. Biochem. Journal 418; 475-489.
Shen, Z.-J.; Esnault, S.; Schinzel, A.; Borner, C.; Malter, J.: The peptidyl-prolyl isomerase Pin1 facilitates cytokine-induced survival of eosinophils by suppressing Bax activation. Nature Immunology 10; 257-265.
Gitzinger, M., Parsons, J.; Reski, R.; Fussenegger, M. (2009): Functional cross-kingdom conservation of mammalian and moss (Physcomitrella patens) transcription, translation and secretion machineries. Plant Biotechnology Journal 7, 73-86
Ludwig-Müller, J., Jülke, S.; Bierfreund, N.M.; Decker, E.L.; Reski, R. (2009): Moss (Physcomitrella patens) GH3 proteins act in auxin homeostasis. New Phytologist 181, 323-338
Ludwig-Müller, J., Decker, E.L.; Reski, R. (2009): Dead end for auxin conjugates in Physcomitrella? Plant Signaling & Behavior 4:2, 116-118
Schwenk, J.; Harmel, N.; Zolles, G.; Bildl, W.; Kulik, A.; Heimrich, B.; Chisaka, O.; Jonas, P.; Schulte, U.; Fakler, B.; Klöcker, N. (2009): Functional proteomics identify cornichon proteins as auxiliary subunits of AMPA receptors. Science 323, 1313.
Berndt, U.; Oellerer, S.; Zhang, Y.; Johnson, A.; Rospert, S. (2009): A signal-anchor sequence stimulates signal recognition particle binding to ribosomes from inside the exit tunnel. PNAS 106 (5): 1398-103
Favory, JJ; Stec, A.; Gruber, H.; Rizzini, L.; Oravecz, A.; Funk, M.; Albert, A.; Cloix, C.; Jenkins, G.; Oakeley, E.; Seidlitz, H.; Nagy, F.; Ulm, R. (2009): Interaction of COP1 and UVR8 regulates UV-B-induced photomorphogenesis and stress acclimation in Arabidopsis. EMBO Journal, published online.
Emmenlauer, M.; Ronneberger, O.; Ponti, A.; Schwarb, P.; Griffa, A.; Filippi, A.; Nitschke, R.; Driever, W.; Burkhardt, H. (2009): XuvTools: free, fast and reliable stitching of large 3D datasets. Journal of Microscopy 233 (1), 42-60.